BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F07LP1|AL427507
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1182 1162 0.0
3x_Contig231 309 5e-84
>3x_Contig1182
Length = 5590
Score = 1162 bits (586), Expect = 0.0
Identities = 601/604 (99%), Gaps = 2/604 (0%)
Strand = Plus / Minus
Query: 380 taatcccccgatcagcttgttcttcttaatatccaacttcggaggatataccaaaccggc 439
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5578 taatcccccgatc-gcttgttcttcttaatatccaacttcggaggatataccaaaccggc 5520
Query: 440 atctgtgtacaacttgaacaaaacgaaatgcaacaaagtagagtaaaactccaagaaagt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5519 atctgtgtacaacttgaacaaaacgaaatgcaacaaagtagagtaaaactccaagaaagt 5460
Query: 500 taacatgatcctgaaatcgacatcgcttggaatattttcagggaacttgtatggtaccaa 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 taacatgatcctgaaatcgacatcgcttggaatattttcagggaacttgtatggtaccaa 5400
Query: 560 ccatctgacatcttcaccttttacactggcttggtaataaacacccttgatggaaacaaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 ccatctgacatcttcaccttttacactggcttggtaataaacacccttgatggaaacaaa 5340
Query: 620 taccttacgtacgcatctttccttggcaatgtatgcagaccattgatcacacatttgctg 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 taccttacgtacgcatctttccttggcaatgtatgcagaccattgatcacacatttgctg 5280
Query: 680 tgcactttgtgtgattctagaagacacttgatcggtagctggcaagttggcgaacaagaa 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 tgcactttgtgtgattctagaagacacttgatcggtagctggcaagttggcgaacaagaa 5220
Query: 740 caacatgttcaaggcatcgtccacatctctcaaggcatcagcaaaagatggataacgttc 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 caacatgttcaaggcatcgtccacatctctcaaggcatcagcaaaagatggataacgttc 5160
Query: 800 cttgatgatattatctaattgatagttaggtctgttctcttccaatctcttagctgctga 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 cttgatgatattatctaattgatagttaggtctgttctcttccaatctcttagctgctga 5100
Query: 860 cacttctcctctccctagagccttagtcaactttttagcaaaagtcttatgttctctgaa 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 cacttctcctctccctagagccttagtcaactttttagcaaaagtcttatgttctctgaa 5040
Query: 920 ctttggccaatacaggctcatgcatcaaatactgaatatccttatwataatagaaagtgg 979
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5039 c-ttggccaatacaggctcatgcatcaaatactgaatatccttataataatagaaagtgg 4981
Query: 980 tagg 983
||||
Sbjct: 4980 tagg 4977
>3x_Contig231
Length = 1500
Score = 309 bits (156), Expect = 5e-84
Identities = 169/172 (98%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 1 gatccaatgtagcttcgctgacggcagaaccaccgcatgatagaatcaaaaattctacga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gatccaatgtag-ttcgctgacggcagaaccaccgcatgatagaatcaaaaattctacga 114
Query: 61 tatccaatggaacttctctgccaacgtaaaatacaaattccgagaacaaagtagcaacag 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 113 tatccaatggaacttctctgccaacgtaaaatacaaattcaaagaacaaagtagcaacag 54
Query: 121 gagaatcgaatttagaaggttgttctaactggtcaccttggttcttattagt 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 gagaatcgaatttagaaggttgttctaactggtcaccttggttcttattagt 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7722
Number of Sequences: 1807
Number of extensions: 7722
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)